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python 3.x - Alternative for vpython for 3D simulations (molecular dynamics)? - Stack Overflow
Visual python(VPython) ..... a bit of guidance.
What are the differences between Python and Vpython?
python - pygame vs. VPython for visualizing PyODE - Stack Overflow
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» pip install vpython
Have look at
http://vispy.org
Python based module.
Also python module specifically for molecular visualization. https://pymol.org/2/
(Full disclosure: I'm the author of this library)
I suggest trying PhalcoPulse. It was designed to be a step up from VPython, directly addressing the limitations you mentioned. It provides full interactive camera controls (including pan, orbit, and zoom) and an easy-to-use API for simulations.
You just define a scene with setup() and loop() methods. Here's a quick example of a vibrating molecule:
Python
from phalcopulse import PhalcoPulseStudio, PhalcoPulseFX, gfx
import numpy as np
class VibratingDimer(PhalcoPulseFX):
def setup(self, ui_manager):
self.atom1_pos = np.array([-1.0, 0, 0])
self.atom2_pos = np.array([1.5, 0, 0])
self.atom2_vel = np.array([0.0, 0, 0])
self.rest_length = 2.0
self.k = 25.0 # Spring constant
def loop(self, delta_time):
# Update physics using Hooke's Law
direction = self.atom2_pos - self.atom1_pos
distance = np.linalg.norm(direction)
if distance > 0:
force = -self.k * (distance - self.rest_length) * (direction / distance)
self.atom2_vel += force * delta_time
self.atom2_pos += self.atom2_vel * delta_time
# Draw the scene
gfx.draw_sphere(radius=0.4, color=(0.8, 0.2, 0.2), center=self.atom1_pos)
gfx.draw_sphere(radius=0.4, color=(0.2, 0.6, 1.0), center=self.atom2_pos)
gfx.draw_cylinder(start=self.atom1_pos, end=self.atom2_pos, radius=0.1)
if __name__ == '__main__':
studio = PhalcoPulseStudio(scene_fx=VibratingDimer())
studio.run()
It's a pip-installable package and the source is on GitHub.
Install:
pip install phalcopulseRepo: https://github.com/PhalcoAi/PhalcoPulse
I can draw a lot of basic stuff in vpython like a cylinder,box,sphere etc. But m facing problems in drawing 2d figures like circle ,square ,arc etc.. Can any one lead me to some libraries or guide me a little bit . I am using the latest version of python.
Thank You.