That is the wrong mental model for using NumPy efficiently. NumPy arrays are stored in contiguous blocks of memory. To append rows or columns to an existing array, the entire array needs to be copied to a new block of memory, creating gaps for the new elements to be stored. This is very inefficient if done repeatedly.

Instead of appending rows, allocate a suitably sized array, and then assign to it row-by-row:

>>> import numpy as np

>>> a = np.zeros(shape=(3, 2))
>>> a
array([[ 0.,  0.],
       [ 0.,  0.],
       [ 0.,  0.]])

>>> a[0] = [1, 2]
>>> a[1] = [3, 4]
>>> a[2] = [5, 6]

>>> a
array([[ 1.,  2.],
       [ 3.,  4.],
       [ 5.,  6.]])
Answer from Stephen Simmons on Stack Overflow
Top answer
1 of 16
611

That is the wrong mental model for using NumPy efficiently. NumPy arrays are stored in contiguous blocks of memory. To append rows or columns to an existing array, the entire array needs to be copied to a new block of memory, creating gaps for the new elements to be stored. This is very inefficient if done repeatedly.

Instead of appending rows, allocate a suitably sized array, and then assign to it row-by-row:

>>> import numpy as np

>>> a = np.zeros(shape=(3, 2))
>>> a
array([[ 0.,  0.],
       [ 0.,  0.],
       [ 0.,  0.]])

>>> a[0] = [1, 2]
>>> a[1] = [3, 4]
>>> a[2] = [5, 6]

>>> a
array([[ 1.,  2.],
       [ 3.,  4.],
       [ 5.,  6.]])
2 of 16
149

A NumPy array is a very different data structure from a list and is designed to be used in different ways. Your use of hstack is potentially very inefficient... every time you call it, all the data in the existing array is copied into a new one. (The append function will have the same issue.) If you want to build up your matrix one column at a time, you might be best off to keep it in a list until it is finished, and only then convert it into an array.

e.g.


mylist = []
for item in data:
    mylist.append(item)
mat = numpy.array(mylist)

item can be a list, an array or any iterable, as long as each item has the same number of elements.
In this particular case (data is some iterable holding the matrix columns) you can simply use


mat = numpy.array(data)

(Also note that using list as a variable name is probably not good practice since it masks the built-in type by that name, which can lead to bugs.)

EDIT:

If for some reason you really do want to create an empty array, you can just use numpy.array([]), but this is rarely useful!

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NumPy
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numpy.empty โ€” NumPy v2.5.dev0 Manual
In this case, it ensures the creation of an array object compatible with that passed in via this argument. New in version 1.20.0. ... Array of uninitialized (arbitrary) data of the given shape, dtype, and order. Object arrays will be initialized to None. ... Return an empty array with shape and type of input.
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Reddit
reddit.com โ€บ r/learnpython โ€บ how can i create a truly empty numpy array which can be merged onto (by a recursive function)?
r/learnpython on Reddit: How can I create a truly empty numpy array which can be merged onto (by a recursive function)?
June 21, 2023 -

I'm kind of stuck conceptually on how to make this happen. I have a recursive method that builds a binary tree, and stores the tree as an instance variable. However, the function is not allowed to return anything, so each recursive call should (according to me) modify in-place the tree instance variable. However, I'm not sure how to set up my instance variable such that all said and done it holds a multidimensional array that represents the tree.

Say I set initialize it as a 1x1 array with element zero as a placeholder. Then as I go about recursing through my tree I can merge to it... but at the end I'm left with a spare [0] element that I don't need. In this case, I'd need some kind of final stop condition and function to remove that unnecessary placeholder stump. I don't think this is possible?

Otherwise, say I initialize the instance variable as None. Then when the first series of recursive calls, it would have to reassign the tree variable to change from None to an ndarray object, but all future calls would have to merge to the array. I don't think this is what the function should be asked to do?

Is there a way to make a truly empty array that I can merge onto? (e.g. np.empty doesn't reallly give an empty array, it gives an array with placeholder values so I'm still left with a useless stump at the end).

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GeeksforGeeks
geeksforgeeks.org โ€บ numpy โ€บ how-to-create-an-empty-and-a-full-numpy-array
How to create an empty and a full NumPy array - GeeksforGeeks
September 19, 2025 - Creating arrays is a basic operation in NumPy. Two commonly used types are: Empty array: This array isnโ€™t initialized with any specific values. Itโ€™s like a blank page, ready to be filled with data later.
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Note.nkmk.me
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NumPy: Create an empty array (np.empty, np.empty_like) | note.nkmk.me
January 22, 2024 - This article explains how to create an empty array (ndarray) in NumPy. There are two methods available: np.empty(), which allows specifying any shape and data type (dtype), and np.empty_like(), which ...
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NumPy
numpy.org โ€บ doc โ€บ stable โ€บ reference โ€บ generated โ€บ numpy.empty.html
numpy.empty โ€” NumPy v2.4 Manual
In this case, it ensures the creation of an array object compatible with that passed in via this argument. New in version 1.20.0. ... Array of uninitialized (arbitrary) data of the given shape, dtype, and order. Object arrays will be initialized to None. ... Return an empty array with shape and type of input.
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w3resource
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NumPy: numpy.empty() function - w3resource
In the second example, an empty 2D array of size (2, 2) is created with the specified data type float. The resulting array contains four undefined floating-point values. The values shown in the output are also machine-dependent and may vary each time the function is called. ... import numpy as np # Define a custom data type dt = np.dtype([('Employee Name:', np.str_, 16), ('Age:', np.int32), ('Salary:', np.float64)]) # Create an empty array with the custom data type employee = np.empty((2, 3), dtype=dt) # Print the array print(employee)
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NumPy Empty Array With Examples - Spark By {Examples}
March 27, 2024 - To create a two-dimensional array of empty use the shape of columns and rows as the value to shape parameter. We passed a list of numbers, [5,3] to the shape parameter. This indicates to numpy.empty() that we want to create an empty NumPy array ...
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Educative
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How to create an empty NumPy array
numpy.zeros(shape, dtype=float, order='C') numpy.empty(shape, dtype=float, order='C') # Shape -> Shape of the new array, e.g., (2, 3) or 2. # dtype -> The desired data-type for the array,e.g., numpy.int8.
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NumPy
numpy.org โ€บ doc โ€บ 2.1 โ€บ reference โ€บ generated โ€บ numpy.empty.html
numpy.empty โ€” NumPy v2.1 Manual
In this case, it ensures the creation of an array object compatible with that passed in via this argument. New in version 1.20.0. ... Array of uninitialized (arbitrary) data of the given shape, dtype, and order. Object arrays will be initialized to None. ... Return an empty array with shape and type of input.
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NumPy
numpy.org โ€บ doc โ€บ 2.2 โ€บ reference โ€บ generated โ€บ numpy.empty.html
numpy.empty โ€” NumPy v2.2 Manual
In this case, it ensures the creation of an array object compatible with that passed in via this argument. New in version 1.20.0. ... Array of uninitialized (arbitrary) data of the given shape, dtype, and order. Object arrays will be initialized to None. ... Return an empty array with shape and type of input.
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Create An Empty Array Using NumPy In Python
May 16, 2025 - NumPyโ€™s empty() function in Python is the fastest way to create an empty array as it allocates memory without initializing the values.
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NumPy
numpy.org โ€บ doc โ€บ 1.25 โ€บ reference โ€บ generated โ€บ numpy.empty.html
numpy.empty โ€” NumPy v1.25 Manual
On the other hand, it requires the user to manually set all the values in the array, and should be used with caution. ... >>> np.empty([2, 2]) array([[ -9.74499359e+001, 6.69583040e-309], [ 2.13182611e-314, 3.06959433e-309]]) #uninitialized
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LabEx
labex.io โ€บ tutorials โ€บ creating-empty-zeroes-and-ones-arrays-86395
Creating Empty, Zeroes, and Ones Arrays in Numpy | LabEx
import numpy as np ## Creating an array with 4 rows and 3 columns x = np.empty([4,3], dtype = int) print(x)
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TutorialsPoint
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How to create an empty and a full NumPy array?
import numpy as np arr_full = np.full((3, 3), 5) print(arr_full) ... In this example, we set the order of the array to 5*5, and then we set the data type to ?int' to create an empty integer array.
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numpy.empty โ€” NumPy v2.3 Manual
In this case, it ensures the creation of an array object compatible with that passed in via this argument. New in version 1.20.0. ... Array of uninitialized (arbitrary) data of the given shape, dtype, and order. Object arrays will be initialized to None. ... Return an empty array with shape and type of input.
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How to Create Empty NumPy Array | Delft Stack
March 11, 2025 - The numpy.zeros() function is a straightforward way to create an empty array filled with zeros. This method is particularly useful when you need to initialize an array of a specific shape and size, with all elements set to zero.
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How do I create an empty NumPy array and append items to it? - TestMu AI Community
October 20, 2025 - I want to create an empty array and add items to it one at a time, similar to Python lists: xs = [] for item in data: xs.append(item) Can I use this approach with NumPy arrays, or is there a better way to create emโ€ฆ
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NumPy
numpy.org โ€บ doc โ€บ stable โ€บ reference โ€บ generated โ€บ numpy.empty_like.html
numpy.empty_like โ€” NumPy v2.4 Manual
>>> import numpy as np >>> a = ([1,2,3], [4,5,6]) # a is array-like >>> np.empty_like(a) array([[-1073741821, -1073741821, 3], # uninitialized [ 0, 0, -1073741821]]) >>> a = np.array([[1., 2., 3.],[4.,5.,6.]]) >>> np.empty_like(a) array([[ -2.00000715e+000, 1.48219694e-323, -2.00000572e+000], # uninitialized [ 4.38791518e-305, -2.00000715e+000, 4.17269252e-309]])