import pandas as pd
import numpy as np
df_describe = pd.DataFrame(dataset)
df_describe.describe()
please note that dataset is your np.array to describe.
import pandas as pd
import numpy as np
df_describe = pd.DataFrame('your np.array')
df_describe.describe()
Answer from INNO TECH on Stack Overflow Top answer 1 of 5
72
import pandas as pd
import numpy as np
df_describe = pd.DataFrame(dataset)
df_describe.describe()
please note that dataset is your np.array to describe.
import pandas as pd
import numpy as np
df_describe = pd.DataFrame('your np.array')
df_describe.describe()
2 of 5
37
This is not a pretty solution, but it gets the job done. The problem is that by specifying multiple dtypes, you are essentially making a 1D-array of tuples (actually np.void), which cannot be described by stats as it includes multiple different types, incl. strings.
This could be resolved by either reading it in two rounds, or using pandas with read_csv.
If you decide to stick to numpy:
import numpy as np
a = np.genfromtxt('sample.txt', delimiter=",",unpack=True,usecols=range(1,9))
s = np.genfromtxt('sample.txt', delimiter=",",unpack=True,usecols=0,dtype='|S1')
from scipy import stats
for arr in a: #do not need the loop at this point, but looks prettier
print(stats.describe(arr))
#Output per print:
DescribeResult(nobs=6, minmax=(0.34999999999999998, 0.70999999999999996), mean=0.54500000000000004, variance=0.016599999999999997, skewness=-0.3049304880932534, kurtosis=-0.9943046886340534)
Note that in this example the final array has dtype as float, not int, but can easily (if necessary) be converted to int using arr.astype(int)
Earth Data Science
earthdatascience.org βΊ home
Run Calculations and Summary Statistics on Numpy Arrays | Earth Data Science - Earth Lab
September 15, 2020 - In the examples above, you calculated summary statistics (e.g. mean, min, max) of one-dimensional numpy arrays, and you received one summary value for the whole array.
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numpy.org βΊ devdocs βΊ reference βΊ routines.statistics.html
Statistics β NumPy v2.5.dev0 Manual
ptp(a[, axis, out, keepdims]) Β· Range of values (maximum - minimum) along an axis
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mverbakel.github.io βΊ 2021-01-27 βΊ descriptive-stats
Descriptive statistics: Python guide (NumPy/Pandas) | Megan Verbakel
January 27, 2021 - They allow us to summarise data sets quickly with just a couple of numbers, and are in general easy to explain to others. In this post Iβll briefly cover when to use which statistics, and then focus on how to do them in Python. My approach is to first use just the base functions (so you understand the mechanics), and then show the equivelant functions for two common packages: NumPy ...
SciPy
docs.scipy.org βΊ doc βΊ scipy βΊ reference βΊ generated βΊ scipy.stats.describe.html
describe β SciPy v1.17.0 Manual
>>> import numpy as np >>> from scipy import stats >>> a = np.arange(10) >>> stats.describe(a) DescribeResult(nobs=10, minmax=(0, 9), mean=4.5, variance=9.166666666666666, skewness=0.0, kurtosis=-1.2242424242424244) >>> b = [[1, 2], [3, 4]] >>> stats.describe(b) DescribeResult(nobs=2, minmax=(array([1, 2]), array([3, 4])), mean=array([2., 3.]), variance=array([2., 2.]), skewness=array([0., 0.]), kurtosis=array([-2., -2.]))
Programiz
programiz.com βΊ python-programming βΊ numpy βΊ statistical-functions
NumPy Statistical Functions (With Examples)
Numpy statistical functions perform statistical data analysis.Statistics involves gathering data, analyzing it, and drawing conclusions based on the information collected. NumPy provides us with various statistical functions that can perform statistical data analysis.
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numpy.org βΊ doc βΊ stable βΊ reference βΊ routines.statistics.html
Statistics β NumPy v2.4 Manual
ptp(a[, axis, out, keepdims]) Β· Range of values (maximum - minimum) along an axis
Esri Community
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Solved: Use NumPy to calculate summary statistics? - Esri Community
December 12, 2021 - I'm able to calculate the total count for each raster value/class using summary stats and was wondering if there's a way to skip summary stats and accomplish this with NumPy instead? ... import arcpy import pandas as pd InRaster = "SomeSingleBandRaster" ##This raster was reclassified to have 4 classes## OutGDB = arcpy.env.scratchGDB SlopeReport = OutGDB + '/' + "SlopeReport" StatsTable = OutGDB + '/' + "StatsTable" #Generate Summary Statistics# arcpy.analysis.Statistics(InRaster, StatsTable, "Value SUM", "Count") #Create array and calculate percentate of each class array = arcpy.da.TableToNumPyArray(StatsTable, ['Count','SUM_Value']) df = pd.DataFrame(array) df['perc'] = df["Count"] / df["Count"].sum() * 100 print(df)ββββββββββββββββββββββββββββββββββ
Real Python
realpython.com βΊ python-statistics
Python Statistics Fundamentals: How to Describe Your Data β Real Python
October 21, 2023 - In this step-by-step tutorial, you'll learn the fundamentals of descriptive statistics and how to calculate them in Python. You'll find out how to describe, summarize, and represent your data visually using NumPy, SciPy, pandas, Matplotlib, and the built-in Python statistics library.
TutorialsPoint
tutorialspoint.com βΊ numpy βΊ numpy_descriptive_statistics.htm
NumPy - Descriptive Statistics
Descriptive statistics in NumPy refers to summarizing and understanding the main features of a dataset through various statistical measures. It includes operations like calculating the mean (average), median, standard deviation, variance, and
NumPy
numpy.org βΊ doc βΊ 2.1 βΊ reference βΊ routines.statistics.html
Statistics β NumPy v2.1 Manual
ptp(a[, axis, out, keepdims]) Β· Range of values (maximum - minimum) along an axis
Pythonhealthdatascience
pythonhealthdatascience.com βΊ content βΊ 01_algorithms βΊ 06_solutions βΊ 04_numpy_stats.html
Statistical procedures in numpy β Python for health data science.
''' # note we use skip_header because the dataset has column descriptors dtoc = np.genfromtxt('dtocs.csv', skip_header=1) breach = np.genfromtxt('breach.csv', skip_header=1) return breach, dtoc breach, dtoc = load_dtoc_dataset() ###### regression code ######## # add an intercept term to the model dtoc = sm.add_constant(dtoc) model = sm.OLS(breach, dtoc) results = model.fit() print(results.summary()) OLS Regression Results ============================================================================== Dep. Variable: y R-squared: 0.714 Model: OLS Adj. R-squared: 0.710 Method: Least Squares F-statistic: 194.6 Date: Thu, 14 Oct 2021 Prob (F-statistic): 6.80e-23 Time: 17:21:39 Log-Likelihood: -945.02 No.
Python Data Science Handbook
jakevdp.github.io βΊ PythonDataScienceHandbook βΊ 02.04-computation-on-arrays-aggregates.html
Aggregations: Min, Max, and Everything In Between | Python Data Science Handbook
Perhaps the most common summary statistics are the mean and standard deviation, which allow you to summarize the "typical" values in a dataset, but other aggregates are useful as well (the sum, product, median, minimum and maximum, quantiles, etc.). NumPy has fast built-in aggregation functions ...
Codecademy
codecademy.com βΊ article βΊ hands-on-statistics-with-numpy-in-python
Hands-on Statistics with NumPy in Python | Codecademy
Learn how to calculate and interpret several descriptive statistics using the Python library NumPy. ... Get started with the most popular summary statistics: mean, median, and mode.